The GenBank/EMBL/DDBJ accession numbers for the nucleotide sequences reported in
this study are AB008503 (strain MY14T 16S rRNA gene), FJ860274 (strain MY14T partial cpn60 gene), FJ860273 (O. flavum TA17T partial cpn60 XL184 clinical trial gene), FJ860269 (O. flavum NS13 partial cpn60 gene), FJ860271 (O. horti OD1T partial cpn60 gene), FJ860270 (O. faecigallinarum YOxT partial cpn60 gene), AB008506 (strain ND5 16S rRNA gene), GQ375149 (strain ND5 partial cpn60 gene), GQ375148 (H. glaciei UMB49T partial cpn60 gene), GQ375147 (H. saxobsidens NS11T partial cpn60 gene), GQ375146 (H. aquatilis DSMZ 18803T partial cpn60 gene) and FJ860272 (H. fonticola S94T partial cpn60 gene). Fig. S1. Comparative total polar lipid profile of Oxalicibacterium solurbis sp. nov. MY14T (a) and Oxalicibacterium flavum TA17T (b). Fig. S2. Phylogenetic analysis based on 16S rRNA gene sequences constructed after multiple alignment of data by clustal w and clustering with maximum-parsimony
method. Fig. S3. Neighbour-joining peptide tree based on clustal w alignment of universal target region (185 aa) of cpn60 gene sequences showing the relationship between the two strains and members of the genus Oxalicibacterium and Herminiimonas. Please note: Wiley-Blackwell is not responsible for the content or functionality RXDX-106 of any supporting materials supplied by the authors. Any queries (other than missing material) should be directed to the corresponding author for the article. “
“Aceticlastic methanogens metabolize acetate to methane and carbon dioxide. The central metabolism and the electron transport chains of these
organisms have already been investigated. However, no particular attention has been paid to the mechanism by which acetate enters the archaeal cell. In our study we investigated Methanosarcina mazei acetate kinase (Ack) and the acetate uptake reaction. At a concentration of 2 mM Fenbendazole acetate, the Ack activity in cell extract of M. mazei was not limiting for the methane formation rate. Instead, the methanogenesis rate was controlled by the substrate concentration and increased 10-fold at 10 mM acetate. Subsequently, we analyzed the involvement of the putative acetate permease MM_0903 using a corresponding deletion mutant. At 2 mM acetate, only 25% of the wild-type methane formation rate was measured in the mutant. This indicated that the supply of acetate to Ack was limiting the rate of methane formation. Moreover, the mutant revealed an increased acetate kinase activity compared with the wild type. These results show for the first time that an acetate transporter is involved in aceticlastic methanogenesis and may be an important factor in the acetate threshold concentration for methanogenesis of Methanosarcina spp.